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authorCalvin <calvin@EESI>2013-03-06 16:50:02 -0500
committerCalvin <calvin@EESI>2013-03-06 16:50:02 -0500
commit0fc232a2f5347b9b2577c2597c9344ae7f4be540 (patch)
tree0cb81125a6f0657c0a2b9bdd3b056500c81ec89a /quikr.py
parent17ece99b4bd7bd3371adf35221f0594a2549e3a8 (diff)
do the matrix rotations and manipulations in quikr_train instead of quikr
Diffstat (limited to 'quikr.py')
-rwxr-xr-xquikr.py1
1 files changed, 0 insertions, 1 deletions
diff --git a/quikr.py b/quikr.py
index b40f1f6..a2b4fcf 100755
--- a/quikr.py
+++ b/quikr.py
@@ -87,7 +87,6 @@ def quikr(input_fasta_location, trained_matrix, kmer, default_lambda):
#form the k-mer sensing matrix
trained_matrix = trained_matrix * default_lambda;
- trained_matrix = np.flipud(trained_matrix);
trained_matrix = np.vstack((np.ones(trained_matrix.shape[1]), trained_matrix))