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authorCalvin <calvin@EESI>2013-05-14 21:12:46 -0400
committerCalvin <calvin@EESI>2013-05-14 21:12:46 -0400
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+# Python Documentation #
+The python version comes with scripts that can be used like the regular quikr
+program, and also a module called quikr so integration with python scripts
+is easier.
+
+If you are switching to use the python scripts instead of the regular, you
+will need to regenerate your trained databases with the python version of
+quikr\_train.
+
+## Function documentation ##
+If you want to use our quikr module, run help on the module:
+
+ >>> import quikr
+ >>> help(quikr)
+## Python Cannot Find XYZ ##
+
+Ensure that you have Python 2.7, Scipy, Numpy, and BIOpython installed
+and that python is setup correctly. You should be able to do this from a python
+prompt without any errors:
+ >>> import numpy
+ >>> import scipy
+ >>> from Bio import SeqIO