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Tools for parsing FASTA files very fast
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kmer_utils.c
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2013-11-23
fix labels, fix spelling of position
Calvin Morrison
2013-11-23
better allocation of memory, make sure to free other memory
Calvin Morrison
2013-11-15
Merge branch 'master' of github.com:mutantturkey/dna-utils
Calvin Morrison
2013-11-15
instead of bitshift, use a equality operator
Calvin Morrison
2013-11-11
fix memleak
Calvin Morrison
2013-11-11
index to kmerfunction
Calvin Morrison
2013-10-17
update kmer utils
Calvin Morrison
2013-10-16
added new functions
Calvin Morrison
2013-10-04
no more branching
Calvin Morrison
2013-10-02
use an external iterator so that we can skip over anything in range of an errorw
Calvin Morrison
2013-10-02
remove unused headers
Calvin Morrison
2013-10-01
update headers, use const for better performance (.500ms on ~2gb file), updat...
Calvin Morrison
2013-09-28
idea
Calvin Morrison
2013-09-14
improve performance of convert_kmer_to_index by using a bitwise OR to convert...
Calvin Morrison
2013-09-12
don't use strtol
Calvin Morrison
2013-09-11
update convert_kmer_to_index for brevity and clarity
Calvin Morrison
2013-09-11
add headers
Calvin Morrison
2013-09-10
Initial commit of some kmer utilities.
Calvin Morrison