Age | Commit message (Expand) | Author |
2014-03-03 | C++ version using unordered map | Calvin Morrison |
2014-02-26 | update sparse | Calvin Morrison |
2014-02-18 | working sparse implementation | Calvin Morrison |
2014-02-06 | whoops, count even if it's zero | Calvin Morrison |
2014-02-05 | Merge branch 'master' of github.com:mutantturkey/dna-utils | Calvin Morrison |
2014-02-05 | add example, rename variables, rename function, improve error function, check... | Calvin Morrison |
2014-02-04 | add examples to readme.md | Calvin Morrison |
2014-02-04 | don't inline hint, breaks clang | Calvin Morrison |
2014-02-02 | somewhat working python module | Calvin Morrison |
2014-02-02 | nonworking commit of interface | Calvin Morrison |
2014-02-02 | add a helper function for python | Calvin Morrison |
2014-02-02 | add install section | Calvin Morrison |
2014-02-02 | add comment | Calvin Morrison |
2014-02-01 | remove str alloc and replace inside s for strstr | Calvin Morrison |
2014-02-01 | use pow_four instead | Calvin Morrison |
2014-02-01 | add getopts to kmer_counts_per_sequene and sparse output options | Calvin Morrison |
2014-02-01 | change headers, organize | Calvin Morrison |
2014-02-01 | use proper types, fix warnings, declare vars at top of section, take FILE in... | Calvin Morrison |
2014-02-01 | fix spacing | Calvin Morrison |
2014-02-01 | update types of functions, remove non existant include and se size_t for strn... | Calvin Morrison |
2014-02-01 | add --help | Calvin Morrison |
2014-02-01 | backport stdin reading | Calvin Morrison |
2014-02-01 | get rid of position, add help | Calvin Morrison |
2014-02-01 | use false instead of 0 | Calvin Morrison |
2014-02-01 | add help function | Calvin Morrison |
2014-02-01 | simplify makefile | Calvin Morrison |
2014-01-31 | remove commas | Calvin Morrison |
2014-01-31 | update readme | Calvin Morrison |
2014-01-31 | add --help text for kmer_total_count | Calvin Morrison |
2014-01-31 | fix argv/c checking | Calvin Morrison |
2014-01-30 | kmer_count_per_sequence: add option to load specific mers from file, add mult... | Calvin Morrison |
2014-01-07 | fix kmer_counts_per_sequence, make sure we convert the array fully, and updat... | Calvin Morrison |
2013-11-24 | performance boost from skipping our first newline. It seems crazy, but this c... | Calvin Morrison |
2013-11-23 | fix labels, fix spelling of position | Calvin Morrison |
2013-11-23 | better allocation of memory, make sure to free other memory | Calvin Morrison |
2013-11-15 | Merge branch 'master' of github.com:mutantturkey/dna-utils | Calvin Morrison |
2013-11-15 | instead of bitshift, use a equality operator | Calvin Morrison |
2013-11-11 | fix memleak | Calvin Morrison |
2013-11-11 | fix warnings | Calvin Morrison |
2013-11-11 | fix printf | Calvin Morrison |
2013-11-11 | added label and nonzero options | Calvin Morrison |
2013-11-11 | index to kmerfunction | Calvin Morrison |
2013-11-07 | update makefile | Calvin Morrison |
2013-11-07 | rename to counts per sequence, don't provide frequencies only counts | Calvin Morrison |
2013-11-07 | rename to counts per sequence, don't provide frequencies only counts | Calvin Morrison |
2013-11-06 | fix free | Calvin Morrison |
2013-10-31 | fix memset again | Calvin Morrison |
2013-10-31 | Revert "fix memset" | Calvin Morrison |
2013-10-31 | fix memset | Calvin Morrison |
2013-10-23 | output individual kmers if requested | Calvin Morrison |