dna-utils.git - Tools for parsing FASTA files very fast

Age	Commit message (Expand)	Author
2013-10-06	Update premature_optimization.md	Calvin Morrison
2013-10-06	Update premature_optimization.md	Calvin Morrison
2013-10-06	Update premature_optimization.md	Calvin Morrison
2013-10-06	A story of my code	Calvin Morrison
2013-10-04	Merge branch 'master' of github.com:mutantturkey/dna-utils	Calvin Morrison
2013-10-04	no more branching	Calvin Morrison
2013-10-03	Update README.md	Calvin Morrison
2013-10-03	Create README.md	Calvin Morrison
2013-10-02	provide errno error details	Calvin Morrison
2013-10-02	formatting	Calvin Morrison
2013-10-02	use an external iterator so that we can skip over anything in range of an errorw	Calvin Morrison
2013-10-02	remove unused headers	Calvin Morrison
2013-10-02	update header	Calvin Morrison
2013-10-02	for kmer frequence per sequence as well	Calvin Morrison
2013-10-02	add check for line length. if read > kmer we are good to go	Calvin Morrison
2013-10-02	add so support for makfile	Calvin Morrison
2013-10-01	update headers, use const for better performance (.500ms on ~2gb file), updat...	Calvin Morrison
2013-09-28	idea	Calvin Morrison
2013-09-14	improve performance of convert_kmer_to_index by using a bitwise OR to convert...	Calvin Morrison
2013-09-13	don't use strlen(line) when we already have that in the read variable	Calvin Morrison
2013-09-12	don't use strtol	Calvin Morrison
2013-09-11	update convert_kmer_to_index for brevity and clarity	Calvin Morrison
2013-09-11	use right types	Calvin Morrison
2013-09-11	move declarations to top, make sure to use the appropriate type	Calvin Morrison
2013-09-11	add headers	Calvin Morrison
2013-09-11	fix binary name, and add -Wextra	Calvin Morrison
2013-09-10	Initial commit of some kmer utilities.	Calvin Morrison