diff options
| -rw-r--r-- | kmer_utils.c | 10 |
1 files changed, 2 insertions, 8 deletions
diff --git a/kmer_utils.c b/kmer_utils.c index 89df3b2..f63caef 100644 --- a/kmer_utils.c +++ b/kmer_utils.c @@ -1,9 +1,3 @@ -#include <stdint.h> -#include <stdio.h> -#include <stdlib.h> -#include <string.h> -#include <unistd.h> - // convert a string of k-mer size base-4 values into a // base-10 index long num_to_index(const char *str, const int kmer, const long error_pos) { @@ -27,9 +21,9 @@ long num_to_index(const char *str, const int kmer, const long error_pos) { // replaces values in a char array of ACGT's and others with // values that correspond to their base 4 value to be used in // num_to_index. -void convert_kmer_to_num(char *str, const long length) { +void convert_kmer_to_num(char *str, const unsigned long length) { - long i = 0; + unsigned long i = 0; for(i = 0; i < length; i++) { // this is _not_ portable, only works with ASCII values. |