diff options
| -rw-r--r-- | kmer_frequency_per_sequence.c | 2 | ||||
| -rw-r--r-- | kmer_total_count.c | 6 |
2 files changed, 4 insertions, 4 deletions
diff --git a/kmer_frequency_per_sequence.c b/kmer_frequency_per_sequence.c index 5fff8ba..5191b86 100644 --- a/kmer_frequency_per_sequence.c +++ b/kmer_frequency_per_sequence.c @@ -37,7 +37,7 @@ int main(int argc, char **argv) { if(counts == NULL) exit(EXIT_FAILURE); - for(i = 0; i < strlen(line) - kmer; i++) { + for(i = 0; i < read - kmer; i++) { counts[convert_kmer_to_index(&line[i], kmer, width)]++; } diff --git a/kmer_total_count.c b/kmer_total_count.c index 48e64b5..23ca512 100644 --- a/kmer_total_count.c +++ b/kmer_total_count.c @@ -41,11 +41,11 @@ int main(int argc, char **argv) { exit(EXIT_FAILURE); while ((read = getline(&line, &len, fh)) != -1) { - if(line[0] != '>') { - for(i = 0; i < strlen(line) - kmer; i++) { + if(line[0] != '>') { + for(i = 0; i < read - kmer; i++) { counts[convert_kmer_to_index(&line[i],kmer, width)]++; } - } + } } for(i = 0; i < width; i++) |