diff options
| author | Calvin Morrison <mutantturkey@gmail.com> | 2013-09-11 09:45:13 -0400 |
|---|---|---|
| committer | Calvin Morrison <mutantturkey@gmail.com> | 2013-09-11 09:45:13 -0400 |
| commit | f682537abf93fcbc1d91320ba256bd8389f5d84d (patch) | |
| tree | 0fedd26b76c68afbd91163d0e574bf1529ae60e5 /kmer_frequency_per_sequence.c | |
| parent | 12fd24e056d18e9f7ee8e1e47a42e47c843c98ff (diff) | |
use right types
Diffstat (limited to 'kmer_frequency_per_sequence.c')
| -rw-r--r-- | kmer_frequency_per_sequence.c | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/kmer_frequency_per_sequence.c b/kmer_frequency_per_sequence.c index 7171193..5fff8ba 100644 --- a/kmer_frequency_per_sequence.c +++ b/kmer_frequency_per_sequence.c @@ -32,11 +32,11 @@ int main(int argc, char **argv) { while ((read = getline(&line, &len, fh)) != -1) { if(line[0] != '>') { + unsigned int i = 0; unsigned long long *counts = malloc((width+ 1) * sizeof(unsigned long long)); if(counts == NULL) exit(EXIT_FAILURE); - unsigned int i = 0; for(i = 0; i < strlen(line) - kmer; i++) { counts[convert_kmer_to_index(&line[i], kmer, width)]++; } |