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authorCalvin Morrison <mutantturkey@gmail.com>2013-10-03 10:16:21 -0400
committerCalvin Morrison <mutantturkey@gmail.com>2013-10-03 10:16:21 -0400
commite72199fcaec7ed75d1a882778919dba74b788cb0 (patch)
tree68e0f790b029be2f375ede6ca0efc2ed6b4403ea
parent90106ba794458787db91b8c85f5f8740831f14bd (diff)
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+dna-utils
+=========
+
+general utilities for manipulating sequences and fasta files - high performance kmer counting
+
+
+Tools included
+==============
+
+kmer_total_count - this program will count each kmer, and print to standard out.
+
+arguemnts: fasta_file kmer_size
+
+example: kmer_total_count SuperManSequences.fasta 8
+
+the order of the array corresponds to AAAA, AAAC, AAAG, AAAT and so on