moved FEAST Libraries

1 files changed, 96 insertions, 0 deletions

diff --git a/FEAST/FSToolbox/Makefile b/FEAST/FSToolbox/Makefile
new file mode 100644
index 0000000..c0806a9
--- /dev/null
+++ b/FEAST/FSToolbox/Makefile
@@ -0,0 +1,96 @@
+# makefile for FEAST
+# Author: Adam Pocock, apocock@cs.man.ac.uk
+# Created: 29/06/2011
+#
+# Part of the Feature Selection Toolbox, please reference
+# "Conditional Likelihood Maximisation: A Unifying Framework for Mutual
+# Information Feature Selection"
+# G. Brown, A. Pocock, M.-J. Zhao, M. Lujan
+# Journal of Machine Learning Research (JMLR), 2012
+#
+# Please check www.cs.manchester.ac.uk/~gbrown/fstoolbox for updates.
+# 
+# Copyright (c) 2010-2011, A. Pocock, G. Brown, The University of Manchester
+# All rights reserved.
+# 
+# Redistribution and use in source and binary forms, with or without modification,
+# are permitted provided that the following conditions are met:
+# 
+#   - Redistributions of source code must retain the above copyright notice, this 
+#     list of conditions and the following disclaimer.
+#   - Redistributions in binary form must reproduce the above copyright notice, 
+#     this list of conditions and the following disclaimer in the documentation 
+#     and/or other materials provided with the distribution.
+#   - Neither the name of The University of Manchester nor the names of its 
+#     contributors may be used to endorse or promote products derived from this 
+#     software without specific prior written permission.
+# 
+# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
+# ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED 
+# WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE 
+# DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR
+# ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES 
+# (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; 
+# LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON 
+# ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT 
+# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS 
+# SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+CXXFLAGS = -O3 -fPIC
+COMPILER = gcc
+MITOOLBOXPATH = ../MIToolbox/
+objects = mRMR_D.o CMIM.o JMI.o DISR.o CondMI.o ICAP.o BetaGamma.o
+
+libFSToolbox.so : $(objects)
+	$(COMPILER) $(CXXFLAGS) -lMIToolbox -L$(MITOOLBOXPATH) -shared -o libFSToolbox.so $(objects)
+
+mRMR_D.o: mRMR_D.c  
+	$(COMPILER) $(CXXFLAGS) -DCOMPILE_C -c mRMR_D.c -I$(MITOOLBOXPATH)
+
+CMIM.o: CMIM.c 
+	$(COMPILER) $(CXXFLAGS) -DCOMPILE_C -c CMIM.c -I$(MITOOLBOXPATH)
+
+JMI.o: JMI.c 
+	$(COMPILER) $(CXXFLAGS) -DCOMPILE_C -c JMI.c -I$(MITOOLBOXPATH)
+
+DISR.o: DISR.c 
+	$(COMPILER) $(CXXFLAGS) -DCOMPILE_C -c DISR.c -I$(MITOOLBOXPATH)
+
+CondMI.o: CondMI.c 
+	$(COMPILER) $(CXXFLAGS) -DCOMPILE_C -c CondMI.c -I$(MITOOLBOXPATH)
+
+ICAP.o: ICAP.c 
+	$(COMPILER) $(CXXFLAGS) -DCOMPILE_C -c ICAP.c -I$(MITOOLBOXPATH)
+
+BetaGamma.o: BetaGamma.c 
+	$(COMPILER) $(CXXFLAGS) -DCOMPILE_C -c BetaGamma.c -I$(MITOOLBOXPATH)
+	
+.PHONY : debug
+debug:
+	$(MAKE) libFSToolbox.so "CXXFLAGS = -g -DDEBUG -fPIC"
+	
+.PHONY : x86
+x86:
+	$(MAKE) libFSToolbox.so "CXXFLAGS = -O3 -fPIC -m32"
+	
+.PHONY : x64
+x64:
+	$(MAKE) libFSToolbox.so "CXXFLAGS = -O3 -fPIC -m64"
+	
+.PHONY : matlab
+matlab:
+	mex -I$(MITOOLBOXPATH) FSToolboxMex.c BetaGamma.c CMIM.c CondMI.c DISR.c ICAP.c JMI.c mRMR_D.c $(MITOOLBOXPATH)MutualInformation.c $(MITOOLBOXPATH)Entropy.c $(MITOOLBOXPATH)CalculateProbability.c $(MITOOLBOXPATH)ArrayOperations.c
+  
+.PHONY : matlab-debug
+matlab-debug:
+	mex -g -I$(MITOOLBOXPATH) FSToolboxMex.c BetaGamma.c CMIM.c CondMI.c DISR.c ICAP.c JMI.c mRMR_D.c $(MITOOLBOXPATH)MutualInformation.c $(MITOOLBOXPATH)Entropy.c $(MITOOLBOXPATH)CalculateProbability.c $(MITOOLBOXPATH)ArrayOperations.c
+
+.PHONY : intel
+intel:
+	$(MAKE) libFSToolbox.so "COMPILER = icc" "CXXFLAGS = -O2 -fPIC -xHost"
+
+.PHONY : clean
+clean:
+	rm *.o 
+	rm libFSToolbox.so
+