all: nbc python install: @echo installing executable files to ${DESTDIR}${PREFIX}/bin @mkdir -p ${DESTDIR}${PREFIX}/bin @cp -vf src/nbc/probabilities-by-read ${DESTDIR}${PREFIX}/bin/probabilities-by-read @cp -vf src/nbc/count ${DESTDIR}${PREFIX}/bin/count-kmers @cp -vf src/python/quikr ${DESTDIR}${PREFIX}/bin/quikr @cp -vf src/python/quikr_train ${DESTDIR}${PREFIX}/bin/quikr_train @cp -vf src/python/multifasta_to_otu ${DESTDIR}${PREFIX}/bin/multifasta_to_otu @cp -vf src/python/generate_kmers ${DESTDIR}${PREFIX}/bin/generate_kmers chmod -v 755 ${DESTDIR}${PREFIX}/bin/probabilities-by-read chmod -v 755 ${DESTDIR}${PREFIX}/bin/count-kmers chmod -v 755 ${DESTDIR}${PREFIX}/bin/quikr chmod -v 755 ${DESTDIR}${PREFIX}/bin/quikr_train chmod -v 755 ${DESTDIR}${PREFIX}/bin/multifasta_to_otu chmod -v 755 ${DESTDIR}${PREFIX}/bin/generate_kmers @cd src/python; python setup.py install nbc: @echo "building nbc" @cd src/nbc; make python: @echo "configuring python" @cd src/python; python setup.py build clean: @echo "cleaning up" @cd src/python; rm build -Rvf @cd src/nbc; make clean