From 7e56f11bb5dacd879cf5bbc454712d543509d841 Mon Sep 17 00:00:00 2001 From: Calvin Date: Tue, 11 Jun 2013 23:05:04 -0400 Subject: finally push this patch to fix the lack of an end --- src/matlab/quikrCustomTrained.m | 1 + 1 file changed, 1 insertion(+) (limited to 'src/matlab/quikrCustomTrained.m') diff --git a/src/matlab/quikrCustomTrained.m b/src/matlab/quikrCustomTrained.m index e594951..fd8bbc7 100644 --- a/src/matlab/quikrCustomTrained.m +++ b/src/matlab/quikrCustomTrained.m @@ -18,6 +18,7 @@ end [status, counts]=unix([sprintf('count-kmers -r %d -1 -u ',k) ' ' inputfasta]); %count the k-mers in the fasta file, in the forward direction, return the counts without labels. if status ~= 0 error('count-kmers failed: ensure count-kmers is in your path.'); +end counts=textscan(counts,'%f'); %read them in as floats. counts=counts{:}; -- cgit v1.2.3