From 0773aaf89678b967588a902df1f5e6f9ccea393d Mon Sep 17 00:00:00 2001
From: Calvin <calvin@EESI>
Date: Tue, 14 May 2013 21:51:40 -0400
Subject: release1.0

---
 src/c/Makefile | 14 ++++++++++++++
 1 file changed, 14 insertions(+)
 create mode 100644 src/c/Makefile

(limited to 'src/c/Makefile')

diff --git a/src/c/Makefile b/src/c/Makefile
new file mode 100644
index 0000000..ba0c799
--- /dev/null
+++ b/src/c/Makefile
@@ -0,0 +1,14 @@
+UNAME := $(shell uname)
+CC = gcc
+QUIKR_TRAIN_CFLAGS = -O3 -s -mtune=native -Wall -lm -lz -D$(UNAME)
+QUIKR_CFLAGS = -O3 -s -mtune=native -Wextra -Wall -lm -pthread -L../ -I../ -std=gnu99 -fopenmp -D$(UNAME)
+all: quikr_train_ quikr_ multifasta_to_otu_
+
+multifasta_to_otu_:
+	$(CC) multifasta_to_otu.c quikr_functions.c nnls.c -o multifasta_to_otu $(QUIKR_CFLAGS)
+quikr_train_:
+	$(CC) quikr_train.c quikr_functions.c -o quikr_train $(QUIKR_TRAIN_CFLAGS)
+quikr_:
+	$(CC) quikr.c quikr_functions.c nnls.c -o quikr $(QUIKR_CFLAGS) -I../
+clean:
+	rm -vf quikr_train quikr multifasta_to_otu
-- 
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