From 2a25a225adcdf8bed6e27963758e7e5740a921e2 Mon Sep 17 00:00:00 2001
From: Calvin Morrison <mutantturkey@gmail.com>
Date: Tue, 28 May 2013 12:04:35 -0400
Subject: Added not about generate_kmers

Added notes to the matlab documentation about the generate kmers requirement.
---
 doc/matlab.markdown | 9 ++++++++-
 1 file changed, 8 insertions(+), 1 deletion(-)

(limited to 'doc')

diff --git a/doc/matlab.markdown b/doc/matlab.markdown
index 1e990d9..ec9249c 100644
--- a/doc/matlab.markdown
+++ b/doc/matlab.markdown
@@ -1,6 +1,13 @@
 # Quikr's Matlab Implementation #
 The Quikr implementation works in Matlab and also works in Octave, but the
-Octave version will run much slower
+Octave version will run much slower.
+
+You will need to install the generate_kmers tool into your $PATH (eg /usr/bin/)
+this file is available in the src/python/ directory. If you use make to install
+the quikr project, it will already be installed. To test this you can run:
+
+    which generate_kmers
+    
 
 ## Quikr Example ##
 This is an example of how to run Quikr. Before you try the example please make
-- 
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