From c788e9089efa7ba6971846b5cdd724b2d8e90e26 Mon Sep 17 00:00:00 2001
From: Calvin <calvin@EESI>
Date: Wed, 15 May 2013 12:43:40 -0400
Subject: change links to work for github

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-# How Can I Install The Quikr Utility? #
-To use Quikr there are several prerequisites. 
-
-## Requirements ##
-+ Mac OS X 10.6.8 or GNU/Linux
-+ 4Gb of RAM minimum. Absolutely neccessary.
-+ gcc that supports OpenMP
-
-### Python Requirements ###
-+ Python 2.7
-+ Scipy 
-+ Numpy
-+ BioPython
-
-### Mac Requirements ###
-+ Mac OS X 10.6.8 (what we have tested)
-+ GCC 4.7 or newer. (gcc 4.2 did not work, and is the default installation)
-+ OCaml compiler mlton
-+ OpenMP libraries (libgomp, usually comes with gcc)
-
-### Linux Requirements ###
-+ GCC 4.7 or newer
-+ OCaml compiler mlton
-+ OpenMP libraries (libgomp, usually comes with gcc)
-
-We also have a Quikr implementation in Matlab so that you can easily integrate
-Quikr into your custom programs and scripts.
-
-### Installation ###
-Our Quikr code is available on our sourceforge download page:
-
-[http://sourceforge.net/projects/quikr/](sourceforge project page)
-
-Our development GIT repository is available here:
-
-[http://rosalind.ece.drexel.edu/git/quikr/](rosalind.ece.drexel.edu/git/quikr/)
-
-To install quikr, download our project and in the folder run:
-
-    make
-    sudo make install
-
-This will install the quikr, quikr\_train and multifasta\_to\_otu utilities.
-To install the python scripts and module systemwide, run
-
-    make python
-    sudo make install_python
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