From 734d4a56a854bf152fee42f05ed02c5ffbaf4035 Mon Sep 17 00:00:00 2001 From: Calvin Date: Fri, 3 May 2013 17:15:48 -0400 Subject: modified command line arguments --- src/python/quikr_train | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/src/python/quikr_train b/src/python/quikr_train index 12e492f..3096d14 100755 --- a/src/python/quikr_train +++ b/src/python/quikr_train @@ -21,8 +21,8 @@ def main(): the quikr function. \n You must supply a kmer. \n ") parser.add_argument("-i", "--input", help="training database of sequences (fasta format)", required=True) - parser.add_argument("-o", "--output", help="sensing matrix (text file)", required=True) - parser.add_argument("-k", "--kmer", help="kmer size (integer)", + parser.add_argument("-o", "--output", help="trained matrix (text file)", required=True) + parser.add_argument("-k", "--kmer", help="kmer size, default size is 6)", type=int, required=False ) parser.add_argument("-z", "--compress", help="compress output (flag)", action='store_true', required=False) -- cgit v1.2.3