From 4a4ae4e3f5e86e5a45f5c027cca58f42f8b0b080 Mon Sep 17 00:00:00 2001 From: mutantturkey Date: Fri, 8 Mar 2013 14:26:05 -0500 Subject: fix multifasta_to_otu --- generate_kmers | 5 +++++ generate_kmers.py | 5 ----- multifasta_to_otu.py | 1 - 3 files changed, 5 insertions(+), 6 deletions(-) create mode 100755 generate_kmers delete mode 100755 generate_kmers.py diff --git a/generate_kmers b/generate_kmers new file mode 100755 index 0000000..38fdf0a --- /dev/null +++ b/generate_kmers @@ -0,0 +1,5 @@ +#!/usr/bin/python +import quikr +import sys + +print quikr.generate_kmers(int(sys.argv[1])) diff --git a/generate_kmers.py b/generate_kmers.py deleted file mode 100755 index 38fdf0a..0000000 --- a/generate_kmers.py +++ /dev/null @@ -1,5 +0,0 @@ -#!/usr/bin/python -import quikr -import sys - -print quikr.generate_kmers(int(sys.argv[1])) diff --git a/multifasta_to_otu.py b/multifasta_to_otu.py index bcc8177..c6fb562 100755 --- a/multifasta_to_otu.py +++ b/multifasta_to_otu.py @@ -7,7 +7,6 @@ from subprocess import * import os import gzip import quikr as q -import quikr_util as qu import sys import numpy as np import argparse -- cgit v1.2.3