dna-utils
=========

general utilities for manipulating sequences and fasta files - high performance kmer counting


Tools included
==============

kmer_total_count - this program will count each kmer, and print to standard out.

arguemnts: fasta_file kmer_size

example: kmer_total_count SuperManSequences.fasta 8

the order of the array corresponds to AAAA, AAAC, AAAG, AAAT and so on