VERSION=\"0.0.2\" CC = g++ CFLAGS = -O3 -s -mtune=native -Wall -Wextra -DVERSION=$(VERSION) -std=c++11 DESTDIR = /usr/local/ all: libkmer.o libkmer.so kmer_total_count kmer_counts_per_sequence sparse.o: sparse.c $(CC) -c sparse.c -o sparse.o $(CFLAGS) libkmer.o: kmer_utils.c $(CC) -c kmer_utils.c -o libkmer.o $(CFLAGS) -fPIC libkmer.so: libkmer.o $(CC) kmer_utils.c -o libkmer.so $(CFLAGS) -shared -fPIC kmer_total_count: kmer_utils.c kmer_total_count.c kmer_utils.h $(CC) kmer_utils.cpp kmer_total_count.c -o kmer_total_count $(CLIBS) $(CFLAGS) kmer_counts_per_sequence: libkmer.o kmer_counts_per_sequence.c kmer_utils.h $(CC) libkmer.o kmer_counts_per_sequence.c -o kmer_counts_per_sequence $(CLIBS) $(CFLAGS) clean: rm -vf kmer_total_count kmer_counts_per_sequence libkmer.so libkmer.o debug: CFLAGS = -ggdb -Wall -Wextra -DVERSION=$(VERSION)\"-debug\" debug: all install: all @cp -vf kmer_counts_per_sequence kmer_total_count $(DESTDIR)/bin/ @cp -vf libkmer.so $(DESTDIR)/lib/