VERSION=\"0.0.5\" CC = x86_64-apple-darwin10-g++-mp-4.8 CFLAGS = -O3 -s -march=native -Wall -Wextra -DVERSION=$(VERSION) -std=c++11 DESTDIR = /usr/local all: libkmer.so kmer_total_count kmer_counts_per_sequence kmer_utils.o \ kmer_locations kmer_continuous_count getline.o: getline/getline.c $(CC) -c getline/getline.c -o getline.o $(CFLAGS) kmer_utils.o: kmer_utils.c getline.o $(CC) -c kmer_utils.c getline.o -O $(CFLAGS) -fPIC -DFORCE_GETLINE=1 libkmer.so: kmer_utils.o getline.o $(CC) getline.o kmer_utils.o -o libkmer.so $(CFLAGS) -shared -fPIC kmer_total_count: kmer_utils.o kmer_total_count.c kmer_utils.h $(CC) getline.o kmer_utils.o kmer_total_count.c -o kmer_total_count $(CLIBS) $(CFLAGS) kmer_counts_per_sequence: kmer_utils.o kmer_counts_per_sequence.c kmer_utils.h $(CC) getline.o kmer_utils.o kmer_counts_per_sequence.c -o kmer_counts_per_sequence $(CLIBS) $(CFLAGS) -DFORCE_GETLINE=1 kmer_continuous_count: kmer_utils.o kmer_continuous_count.c kmer_utils.h $(CC) getline.o kmer_utils.o kmer_continuous_count.c -o kmer_continuous_count $(CLIBS) $(CFLAGS) kmer_locations: kmer_utils.o kmer_locations.c kmer_utils.h $(CC) getline.o kmer_utils.o kmer_locations.c -o kmer_locations $(CLIBS) $(CFLAGS) -DFORCE_GETLINE=1 clean: rm -vf kmer_total_count kmer_counts_per_sequence kmer_continuous_count \ kmer_utils.o libkmer.so kmer_locations getline.o debug: CFLAGS = -ggdb -Wall -Wextra -DVERSION=$(VERSION)\"-debug\" -std=c++11 debug: all install: all install kmer_counts_per_sequence $(DESTDIR)/bin install kmer_total_count $(DESTDIR)/bin install kmer_continuous_count $(DESTDIR)/bin install kmer_locations $(DESTDIR)/bin cp -vf libkmer.so $(DESTDIR)/lib/