From 4d00f90fd8b1b9e38eea297336ee83a5e5c9e764 Mon Sep 17 00:00:00 2001
From: Calvin Morrison <mutantturkey@gmail.com>
Date: Sat, 28 Sep 2013 11:52:45 -0700
Subject: idea

---
 kmer_frequency_per_sequence.c | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

(limited to 'kmer_frequency_per_sequence.c')

diff --git a/kmer_frequency_per_sequence.c b/kmer_frequency_per_sequence.c
index 5191b86..8f0d6b0 100644
--- a/kmer_frequency_per_sequence.c
+++ b/kmer_frequency_per_sequence.c
@@ -37,8 +37,10 @@ int main(int argc, char **argv) {
       if(counts == NULL) 
         exit(EXIT_FAILURE);
 
+      convert_kmer_to_num(line, read);
+
       for(i = 0; i < read - kmer; i++) {
-        counts[convert_kmer_to_index(&line[i], kmer, width)]++;
+        counts[num_to_index(&line[i],kmer, width)]++;
       }
 
       unsigned long total = 0;
-- 
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