dna-utils.git/Makefile, branch mutant-refactor-total-count Tools for parsing FASTA files very fast http://git.ceux.org/dna-utils.git/atom?h=mutant-refactor-total-count 2013-12-31T16:22:01+00:00 Use optimizations 2013-12-31T16:22:01+00:00 orbitz orbitz@gmail.com 2013-12-31T16:22:01+00:00 urn:sha1:00cf3e3ed34db6f7e53c5bd5998c231becee780d Cleanup Makefile, add debugging output (for now) 2013-12-29T12:07:08+00:00 orbitz orbitz@gmail.com 2013-12-29T12:07:08+00:00 urn:sha1:71a989a43ce9e7e5d945427746aa1d816ac6fabc update makefile 2013-11-07T22:25:44+00:00 Calvin Morrison mutantturkey@gmail.com 2013-11-07T22:25:44+00:00 urn:sha1:d2db15836b836696dfff747a54d0b442e368b5b4 rename to counts per sequence, don't provide frequencies only counts 2013-11-07T22:25:06+00:00 Calvin Morrison mutantturkey@gmail.com 2013-11-07T22:25:06+00:00 urn:sha1:b508436d6982205508d531ba19c9980570946ae7 update makefile with dependencies and proper static linking 2013-10-17T17:30:03+00:00 Calvin Morrison mutantturkey@gmail.com 2013-10-17T17:30:03+00:00 urn:sha1:801b5931b82a111955a9c607d43aeaa8f42afae8 add a static library to our makefile 2013-10-17T14:50:15+00:00 Calvin Morrison mutantturkey@gmail.com 2013-10-17T14:50:15+00:00 urn:sha1:c08ffceaaccd3d1140443fd29f81f8dc9c24ca3a update makefile 2013-10-16T16:43:00+00:00 Calvin Morrison mutantturkey@gmail.com 2013-10-16T16:43:00+00:00 urn:sha1:7a5e77d675f78f86ab4486f5240b36ff0f25a066 don't use the num_to_index function for more speeeeed 2013-10-10T23:44:15+00:00 Calvin Morrison mutantturkey@gmail.com 2013-10-10T23:44:15+00:00 urn:sha1:e2291efb098885e6d7a18abed8babb59e0a2fb49 update makefile 2013-10-10T23:42:42+00:00 Calvin Morrison mutantturkey@gmail.com 2013-10-10T23:42:42+00:00 urn:sha1:c1121f31802fe1437fb97efabae6dc09edfce246 use an external iterator so that we can skip over anything in range of an errorw 2013-10-03T01:38:43+00:00 Calvin Morrison mutantturkey@gmail.com 2013-10-03T01:38:43+00:00 urn:sha1:f47ce6202d2bb6425638a9142bbbebd7d44fb64f