From f5ac0df9d42de657a64e15d3f0cfa2198a1921c6 Mon Sep 17 00:00:00 2001
From: Calvin Morrison <mutantturkey@gmail.com>
Date: Thu, 27 Mar 2014 15:10:04 -0400
Subject: Add scoring for specific combinations.

- add scoring for specific combos
- update readme
- add CLI args for score_mers.py
- update score_wrapper
- use more generic print functions in score_mers
---
 src/score_wrapper.sh | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

(limited to 'src/score_wrapper.sh')

diff --git a/src/score_wrapper.sh b/src/score_wrapper.sh
index 1c6f856..ee7e40d 100755
--- a/src/score_wrapper.sh
+++ b/src/score_wrapper.sh
@@ -10,7 +10,7 @@ function clean_exit {
 }
 trap clean_exit SIGINT
 
-score_mers.py $1 $2 $3 $4 & </dev/null
+score_mers.py -s $1 -f $2 -b $3 -o $4 & </dev/null
 pid=$!
 
 wait $pid
-- 
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