From 6138139143c881fa4b6536d6b231db4cb0ff0217 Mon Sep 17 00:00:00 2001 From: Calvin Morrison Date: Thu, 27 Mar 2014 15:18:38 -0400 Subject: improve output, add number of primers in first colum. this closes #12 --- src/score_mers.py | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) (limited to 'src/score_mers.py') diff --git a/src/score_mers.py b/src/score_mers.py index 438a8e9..a7c27c9 100755 --- a/src/score_mers.py +++ b/src/score_mers.py @@ -190,11 +190,12 @@ def percentage(part, whole, precision=2): return str(percent) + "%" def write_header(fh): - fh.write("Combination\tScore\tFG_mean_dist\tFG_stdev_dist\tBG_ratio\n") + fh.write("nb_primers\tCombination\tScore\tFG_mean_dist\tFG_stdev_dist\tBG_ratio\n") def write_result(fh, score_res): combination, score_val, fg_mean_dist, fg_stddev_dist, bg_ratio = score_res - fh.write(str(combination) + "\t") + fh.write(str(len(combination)) + "\t") + fh.write(' '.join(combination) + "\t") fh.write(str(score_val) + "\t") fh.write(str(fg_mean_dist) + "\t") fh.write(str(fg_stddev_dist) + "\t") -- cgit v1.2.3