From de1f88095a623ebe1d83cbfa05868760343ad323 Mon Sep 17 00:00:00 2001 From: Calvin Morrison Date: Thu, 27 Mar 2014 22:13:24 -0400 Subject: add doc for ignore all from file --- README.md | 1 + 1 file changed, 1 insertion(+) diff --git a/README.md b/README.md index f6a4087..c3aa6af 100644 --- a/README.md +++ b/README.md @@ -95,6 +95,7 @@ min\_foreground\_binding\_average | 50000 | elminate mers that appear less frequ max\_select | 15 | maximum number of mers to pick max\_check | 35 | maximum number of mers to select (check the top #) ignore\_mers | Not Enabled | mers to explicitly ignore, space seperated ex. ignore\_mers="ACAGTA ACCATAA ATATATAT" +ignore\_all\_mers\_from\_files | Not Enabled | ignore any mers found in these files. space seperated. foreground | Not Enabled | path of foreground file background | Not Enabled | path of background file max\_consecutive\_binding | 4 | The maxium number of consecutive binding nucleotides in homodimer and heterodimers -- cgit v1.2.3