SelectiveWholeGenomeAmplification.git/SelectiveGenomeAmplificationUI, branch master Parameterized sweeps of FASTA files to help locate useful primers. Work done for Penn bio research guys http://git.ceux.org/SelectiveWholeGenomeAmplification.git/atom?h=master 2014-04-07T16:52:49+00:00 Rename! 2014-04-07T16:52:49+00:00 Calvin Morrison mutantturkey@gmail.com 2014-04-07T16:52:49+00:00 urn:sha1:ff15f36a46617effd1ecb1dafb289c3c18cc836a wait on exit 2014-04-07T15:09:31+00:00 Calvin Morrison mutantturkey@gmail.com 2014-04-07T15:09:31+00:00 urn:sha1:29ab041cb474852f748701aedc800b776bdc81c6 add UI for scorign func, update doc and varaibles 2014-03-31T20:31:15+00:00 Calvin Morrison mutantturkey@gmail.com 2014-03-31T20:31:15+00:00 urn:sha1:38bb1f3a1303e2f73ff1c939bf63b5108182b440 Add feature to have a top-scores file. closes issue #21 2014-03-31T17:27:06+00:00 Calvin Morrison mutantturkey@gmail.com 2014-03-31T17:27:06+00:00 urn:sha1:5a5d89d3881cb0d9014168845d96e5eebeb2bd42 Add support for ignoring all mers. and more 2014-03-28T02:08:35+00:00 Calvin Morrison mutantturkey@gmail.com 2014-03-28T02:08:35+00:00 urn:sha1:a17c7fdf6e74652ab05eaa00203b40ad7a41e549 - add a check for filters. quit if no mers make it - add a final fg mer selection file in the $current_run folder - add a filter/ folder as not to clutter the current run - fix double quote syntax - add option for ignore all for the UI add primer_weight to our score function 2014-03-26T18:16:34+00:00 Calvin Morrison mutantturkey@gmail.com 2014-03-26T18:16:34+00:00 urn:sha1:f6fe059e37d8e8ee0cb6f7acf72c8918473ad3f7 add fg_weight to SelectiveGenomeAmplificationUI 2014-03-25T22:00:32+00:00 Calvin Morrison mutantturkey@gmail.com 2014-03-25T22:00:32+00:00 urn:sha1:045c8168326144865fc8e301e40f58ff8d4b7e68 add average binding filter 2014-03-25T20:33:36+00:00 Calvin Morrison mutantturkey@gmail.com 2014-03-25T20:33:36+00:00 urn:sha1:06fa848b90982ddcd4308bb88d70a0d5f11f785b fix background as foreground 2014-03-05T21:13:05+00:00 Calvin Morrison mutantturkey@gmail.com 2014-03-05T21:13:05+00:00 urn:sha1:531bec5517bfcef07b05ce6325220cb3d235abfe update defaults and align variable names with global env variables 2014-03-03T19:59:42+00:00 Calvin Morrison mutantturkey@gmail.com 2014-03-03T19:59:42+00:00 urn:sha1:ecb8a85eb5cf25e0aba4a3d2d7abf94f63f17297